Lit_Model
BaseLitModel
- class unKR.lit_model.BaseLitModel.BaseLitModel(model, args: Namespace | None = None, src_list=None, dst_list=None, rel_list=None)[source]
Bases:
LightningModule
Generic PyTorch-Lightning class that must be initialized with a PyTorch module.
- configure_optimizers()[source]
Choose what optimizers and learning-rate schedulers to use in your optimization. Normally you’d need one. But in the case of GANs or similar you might have multiple.
- Returns:
Any of these 6 options.
Single optimizer.
List or Tuple of optimizers.
Two lists - The first list has multiple optimizers, and the second has multiple LR schedulers (or multiple
lr_scheduler_config
).Dictionary, with an
"optimizer"
key, and (optionally) a"lr_scheduler"
key whose value is a single LR scheduler orlr_scheduler_config
.Tuple of dictionaries as described above, with an optional
"frequency"
key.None - Fit will run without any optimizer.
The
lr_scheduler_config
is a dictionary which contains the scheduler and its associated configuration. The default configuration is shown below.lr_scheduler_config = { # REQUIRED: The scheduler instance "scheduler": lr_scheduler, # The unit of the scheduler's step size, could also be 'step'. # 'epoch' updates the scheduler on epoch end whereas 'step' # updates it after a optimizer update. "interval": "epoch", # How many epochs/steps should pass between calls to # `scheduler.step()`. 1 corresponds to updating the learning # rate after every epoch/step. "frequency": 1, # Metric to to monitor for schedulers like `ReduceLROnPlateau` "monitor": "val_loss", # If set to `True`, will enforce that the value specified 'monitor' # is available when the scheduler is updated, thus stopping # training if not found. If set to `False`, it will only produce a warning "strict": True, # If using the `LearningRateMonitor` callback to monitor the # learning rate progress, this keyword can be used to specify # a custom logged name "name": None, }
When there are schedulers in which the
.step()
method is conditioned on a value, such as thetorch.optim.lr_scheduler.ReduceLROnPlateau
scheduler, Lightning requires that thelr_scheduler_config
contains the keyword"monitor"
set to the metric name that the scheduler should be conditioned on.# The ReduceLROnPlateau scheduler requires a monitor def configure_optimizers(self): optimizer = Adam(...) return { "optimizer": optimizer, "lr_scheduler": { "scheduler": ReduceLROnPlateau(optimizer, ...), "monitor": "metric_to_track", "frequency": "indicates how often the metric is updated" # If "monitor" references validation metrics, then "frequency" should be set to a # multiple of "trainer.check_val_every_n_epoch". }, } # In the case of two optimizers, only one using the ReduceLROnPlateau scheduler def configure_optimizers(self): optimizer1 = Adam(...) optimizer2 = SGD(...) scheduler1 = ReduceLROnPlateau(optimizer1, ...) scheduler2 = LambdaLR(optimizer2, ...) return ( { "optimizer": optimizer1, "lr_scheduler": { "scheduler": scheduler1, "monitor": "metric_to_track", }, }, {"optimizer": optimizer2, "lr_scheduler": scheduler2}, )
Metrics can be made available to monitor by simply logging it using
self.log('metric_to_track', metric_val)
in yourLightningModule
.Note
The
frequency
value specified in a dict along with theoptimizer
key is an int corresponding to the number of sequential batches optimized with the specific optimizer. It should be given to none or to all of the optimizers. There is a difference between passing multiple optimizers in a list, and passing multiple optimizers in dictionaries with a frequency of 1:In the former case, all optimizers will operate on the given batch in each optimization step.
In the latter, only one optimizer will operate on the given batch at every step.
This is different from the
frequency
value specified in thelr_scheduler_config
mentioned above.def configure_optimizers(self): optimizer_one = torch.optim.SGD(self.model.parameters(), lr=0.01) optimizer_two = torch.optim.SGD(self.model.parameters(), lr=0.01) return [ {"optimizer": optimizer_one, "frequency": 5}, {"optimizer": optimizer_two, "frequency": 10}, ]
In this example, the first optimizer will be used for the first 5 steps, the second optimizer for the next 10 steps and that cycle will continue. If an LR scheduler is specified for an optimizer using the
lr_scheduler
key in the above dict, the scheduler will only be updated when its optimizer is being used.Examples:
# most cases. no learning rate scheduler def configure_optimizers(self): return Adam(self.parameters(), lr=1e-3) # multiple optimizer case (e.g.: GAN) def configure_optimizers(self): gen_opt = Adam(self.model_gen.parameters(), lr=0.01) dis_opt = Adam(self.model_dis.parameters(), lr=0.02) return gen_opt, dis_opt # example with learning rate schedulers def configure_optimizers(self): gen_opt = Adam(self.model_gen.parameters(), lr=0.01) dis_opt = Adam(self.model_dis.parameters(), lr=0.02) dis_sch = CosineAnnealing(dis_opt, T_max=10) return [gen_opt, dis_opt], [dis_sch] # example with step-based learning rate schedulers # each optimizer has its own scheduler def configure_optimizers(self): gen_opt = Adam(self.model_gen.parameters(), lr=0.01) dis_opt = Adam(self.model_dis.parameters(), lr=0.02) gen_sch = { 'scheduler': ExponentialLR(gen_opt, 0.99), 'interval': 'step' # called after each training step } dis_sch = CosineAnnealing(dis_opt, T_max=10) # called every epoch return [gen_opt, dis_opt], [gen_sch, dis_sch] # example with optimizer frequencies # see training procedure in `Improved Training of Wasserstein GANs`, Algorithm 1 # https://arxiv.org/abs/1704.00028 def configure_optimizers(self): gen_opt = Adam(self.model_gen.parameters(), lr=0.01) dis_opt = Adam(self.model_dis.parameters(), lr=0.02) n_critic = 5 return ( {'optimizer': dis_opt, 'frequency': n_critic}, {'optimizer': gen_opt, 'frequency': 1} )
Note
Some things to know:
Lightning calls
.backward()
and.step()
on each optimizer and learning rate scheduler as needed.If you use 16-bit precision (
precision=16
), Lightning will automatically handle the optimizers.If you use multiple optimizers,
training_step()
will have an additionaloptimizer_idx
parameter.If you use
torch.optim.LBFGS
, Lightning handles the closure function automatically for you.If you use multiple optimizers, gradients will be calculated only for the parameters of current optimizer at each training step.
If you need to control how often those optimizers step or override the default
.step()
schedule, override theoptimizer_step()
hook.
- forward(x)[source]
Same as
torch.nn.Module.forward()
.- Parameters:
*args – Whatever you decide to pass into the forward method.
**kwargs – Keyword arguments are also possible.
- Returns:
Your model’s output
- get_results(results, mode)[source]
Summarize the results of each batch and calculate the final result of the epoch :param results: The results of each batch :type results: [type] :param mode: Eval or Test :type mode: [type]
- Returns:
The final result of the epoch
- Return type:
- test_step(batch, batch_idx)[source]
Operates on a single batch of data from the test set. In this step you’d normally generate examples or calculate anything of interest such as accuracy.
# the pseudocode for these calls test_outs = [] for test_batch in test_data: out = test_step(test_batch) test_outs.append(out) test_epoch_end(test_outs)
- Parameters:
- Returns:
Any of.
Any object or value
None
- Testing will skip to the next batch
# if you have one test dataloader: def test_step(self, batch, batch_idx): ... # if you have multiple test dataloaders: def test_step(self, batch, batch_idx, dataloader_idx): ...
Examples:
# CASE 1: A single test dataset def test_step(self, batch, batch_idx): x, y = batch # implement your own out = self(x) loss = self.loss(out, y) # log 6 example images # or generated text... or whatever sample_imgs = x[:6] grid = torchvision.utils.make_grid(sample_imgs) self.logger.experiment.add_image('example_images', grid, 0) # calculate acc labels_hat = torch.argmax(out, dim=1) test_acc = torch.sum(y == labels_hat).item() / (len(y) * 1.0) # log the outputs! self.log_dict({'test_loss': loss, 'test_acc': test_acc})
If you pass in multiple test dataloaders,
test_step()
will have an additional argument.# CASE 2: multiple test dataloaders def test_step(self, batch, batch_idx, dataloader_idx): # dataloader_idx tells you which dataset this is. ...
Note
If you don’t need to test you don’t need to implement this method.
Note
When the
test_step()
is called, the model has been put in eval mode and PyTorch gradients have been disabled. At the end of the test epoch, the model goes back to training mode and gradients are enabled.
- training_step(batch, batch_idx)[source]
Here you compute and return the training loss and some additional metrics for e.g. the progress bar or logger.
- Parameters:
batch (
Tensor
| (Tensor
, …) | [Tensor
, …]) – The output of yourDataLoader
. A tensor, tuple or list.batch_idx (
int
) – Integer displaying index of this batchoptimizer_idx (
int
) – When using multiple optimizers, this argument will also be present.hiddens (
Any
) – Passed in if :paramref:`~pytorch_lightning.core.lightning.LightningModule.truncated_bptt_steps` > 0.
- Returns:
Any of.
Tensor
- The loss tensordict
- A dictionary. Can include any keys, but must include the key'loss'
None
- Training will skip to the next batch. This is only for automatic optimization.This is not supported for multi-GPU, TPU, IPU, or DeepSpeed.
In this step you’d normally do the forward pass and calculate the loss for a batch. You can also do fancier things like multiple forward passes or something model specific.
Example:
def training_step(self, batch, batch_idx): x, y, z = batch out = self.encoder(x) loss = self.loss(out, x) return loss
If you define multiple optimizers, this step will be called with an additional
optimizer_idx
parameter.# Multiple optimizers (e.g.: GANs) def training_step(self, batch, batch_idx, optimizer_idx): if optimizer_idx == 0: # do training_step with encoder ... if optimizer_idx == 1: # do training_step with decoder ...
If you add truncated back propagation through time you will also get an additional argument with the hidden states of the previous step.
# Truncated back-propagation through time def training_step(self, batch, batch_idx, hiddens): # hiddens are the hidden states from the previous truncated backprop step out, hiddens = self.lstm(data, hiddens) loss = ... return {"loss": loss, "hiddens": hiddens}
Note
The loss value shown in the progress bar is smoothed (averaged) over the last values, so it differs from the actual loss returned in train/validation step.
- validation_step(batch, batch_idx)[source]
Operates on a single batch of data from the validation set. In this step you’d might generate examples or calculate anything of interest like accuracy.
# the pseudocode for these calls val_outs = [] for val_batch in val_data: out = validation_step(val_batch) val_outs.append(out) validation_epoch_end(val_outs)
- Parameters:
- Returns:
Any object or value
None
- Validation will skip to the next batch
# pseudocode of order val_outs = [] for val_batch in val_data: out = validation_step(val_batch) if defined("validation_step_end"): out = validation_step_end(out) val_outs.append(out) val_outs = validation_epoch_end(val_outs)
# if you have one val dataloader: def validation_step(self, batch, batch_idx): ... # if you have multiple val dataloaders: def validation_step(self, batch, batch_idx, dataloader_idx): ...
Examples:
# CASE 1: A single validation dataset def validation_step(self, batch, batch_idx): x, y = batch # implement your own out = self(x) loss = self.loss(out, y) # log 6 example images # or generated text... or whatever sample_imgs = x[:6] grid = torchvision.utils.make_grid(sample_imgs) self.logger.experiment.add_image('example_images', grid, 0) # calculate acc labels_hat = torch.argmax(out, dim=1) val_acc = torch.sum(y == labels_hat).item() / (len(y) * 1.0) # log the outputs! self.log_dict({'val_loss': loss, 'val_acc': val_acc})
If you pass in multiple val dataloaders,
validation_step()
will have an additional argument.# CASE 2: multiple validation dataloaders def validation_step(self, batch, batch_idx, dataloader_idx): # dataloader_idx tells you which dataset this is. ...
Note
If you don’t need to validate you don’t need to implement this method.
Note
When the
validation_step()
is called, the model has been put in eval mode and PyTorch gradients have been disabled. At the end of validation, the model goes back to training mode and gradients are enabled.
BEUrRELitModel
- class unKR.lit_model.BEUrRELitModel.BEUrRELitModel(model, args)[source]
Bases:
BaseLitModel
Processing of training, evaluation and testing.
- configure_optimizers()[source]
Setting optimizer and lr_scheduler.
- Returns:
Record the optimizer and lr_scheduler, type: dict.
- Return type:
optim_dict
- forward(x)[source]
Same as
torch.nn.Module.forward()
.- Parameters:
*args – Whatever you decide to pass into the forward method.
**kwargs – Keyword arguments are also possible.
- Returns:
Your model’s output
- test_epoch_end(results) None [source]
Called at the end of a test epoch with the output of all test steps.
# the pseudocode for these calls test_outs = [] for test_batch in test_data: out = test_step(test_batch) test_outs.append(out) test_epoch_end(test_outs)
- Parameters:
outputs – List of outputs you defined in
test_step_end()
, or if there are multiple dataloaders, a list containing a list of outputs for each dataloader- Returns:
None
Note
If you didn’t define a
test_step()
, this won’t be called.Examples
With a single dataloader:
def test_epoch_end(self, outputs): # do something with the outputs of all test batches all_test_preds = test_step_outputs.predictions some_result = calc_all_results(all_test_preds) self.log(some_result)
With multiple dataloaders, outputs will be a list of lists. The outer list contains one entry per dataloader, while the inner list contains the individual outputs of each test step for that dataloader.
def test_epoch_end(self, outputs): final_value = 0 for dataloader_outputs in outputs: for test_step_out in dataloader_outputs: # do something final_value += test_step_out self.log("final_metric", final_value)
- test_step(batch, batch_idx)[source]
Getting samples and test in BEUrRE model.
- Parameters:
batch – The evaluation data.
batch_idx – The dict_key in batch, type: list.
- Returns:
mae, mse, wmr, wmrr, mr mrr and hits@1,3,5,10.
- Return type:
results
- training_step(batch, batch_idx)[source]
Getting samples and training in BEUrRE model.
- Parameters:
batch – The training data.
batch_idx – The dict_key in batch, type: list.
- Returns:
The training loss for back propagation.
- Return type:
loss
- validation_epoch_end(results) None [source]
Called at the end of the validation epoch with the outputs of all validation steps.
# the pseudocode for these calls val_outs = [] for val_batch in val_data: out = validation_step(val_batch) val_outs.append(out) validation_epoch_end(val_outs)
- Parameters:
outputs – List of outputs you defined in
validation_step()
, or if there are multiple dataloaders, a list containing a list of outputs for each dataloader.- Returns:
None
Note
If you didn’t define a
validation_step()
, this won’t be called.Examples
With a single dataloader:
def validation_epoch_end(self, val_step_outputs): for out in val_step_outputs: ...
With multiple dataloaders, outputs will be a list of lists. The outer list contains one entry per dataloader, while the inner list contains the individual outputs of each validation step for that dataloader.
def validation_epoch_end(self, outputs): for dataloader_output_result in outputs: dataloader_outs = dataloader_output_result.dataloader_i_outputs self.log("final_metric", final_value)
FocusELitModel
GMUCLitModel
- class unKR.lit_model.GMUCLitModel.GMUCLitModel(model, train_sampler, args)[source]
Bases:
BaseLitModel
Processing of training, evaluation and testing for GMUC and GMUC+.
- configure_optimizers()[source]
Setting optimizer and lr_scheduler.
- Returns:
Record the optimizer and lr_scheduler, type: dict.
- Return type:
optim_dict
- forward(x)[source]
Same as
torch.nn.Module.forward()
.- Parameters:
*args – Whatever you decide to pass into the forward method.
**kwargs – Keyword arguments are also possible.
- Returns:
Your model’s output
- get_results(results, mode)[source]
Summarize the results of each batch and calculate the final result of the epoch :param results: The results of each batch :type results: [type] :param mode: Eval or Test :type mode: [type]
- Returns:
The final result of the epoch
- Return type:
- test_epoch_end(results) None [source]
Called at the end of a test epoch with the output of all test steps.
# the pseudocode for these calls test_outs = [] for test_batch in test_data: out = test_step(test_batch) test_outs.append(out) test_epoch_end(test_outs)
- Parameters:
outputs – List of outputs you defined in
test_step_end()
, or if there are multiple dataloaders, a list containing a list of outputs for each dataloader- Returns:
None
Note
If you didn’t define a
test_step()
, this won’t be called.Examples
With a single dataloader:
def test_epoch_end(self, outputs): # do something with the outputs of all test batches all_test_preds = test_step_outputs.predictions some_result = calc_all_results(all_test_preds) self.log(some_result)
With multiple dataloaders, outputs will be a list of lists. The outer list contains one entry per dataloader, while the inner list contains the individual outputs of each test step for that dataloader.
def test_epoch_end(self, outputs): final_value = 0 for dataloader_outputs in outputs: for test_step_out in dataloader_outputs: # do something final_value += test_step_out self.log("final_metric", final_value)
- test_step(batch, batch_idx)[source]
Operates on a single batch of data from the test set. In this step you’d normally generate examples or calculate anything of interest such as accuracy.
# the pseudocode for these calls test_outs = [] for test_batch in test_data: out = test_step(test_batch) test_outs.append(out) test_epoch_end(test_outs)
- Parameters:
- Returns:
Any of.
Any object or value
None
- Testing will skip to the next batch
# if you have one test dataloader: def test_step(self, batch, batch_idx): ... # if you have multiple test dataloaders: def test_step(self, batch, batch_idx, dataloader_idx): ...
Examples:
# CASE 1: A single test dataset def test_step(self, batch, batch_idx): x, y = batch # implement your own out = self(x) loss = self.loss(out, y) # log 6 example images # or generated text... or whatever sample_imgs = x[:6] grid = torchvision.utils.make_grid(sample_imgs) self.logger.experiment.add_image('example_images', grid, 0) # calculate acc labels_hat = torch.argmax(out, dim=1) test_acc = torch.sum(y == labels_hat).item() / (len(y) * 1.0) # log the outputs! self.log_dict({'test_loss': loss, 'test_acc': test_acc})
If you pass in multiple test dataloaders,
test_step()
will have an additional argument.# CASE 2: multiple test dataloaders def test_step(self, batch, batch_idx, dataloader_idx): # dataloader_idx tells you which dataset this is. ...
Note
If you don’t need to test you don’t need to implement this method.
Note
When the
test_step()
is called, the model has been put in eval mode and PyTorch gradients have been disabled. At the end of the test epoch, the model goes back to training mode and gradients are enabled.
- training_step(batch, batch_idx)[source]
Here you compute and return the training loss and some additional metrics for e.g. the progress bar or logger.
- Parameters:
batch (
Tensor
| (Tensor
, …) | [Tensor
, …]) – The output of yourDataLoader
. A tensor, tuple or list.batch_idx (
int
) – Integer displaying index of this batchoptimizer_idx (
int
) – When using multiple optimizers, this argument will also be present.hiddens (
Any
) – Passed in if :paramref:`~pytorch_lightning.core.lightning.LightningModule.truncated_bptt_steps` > 0.
- Returns:
Any of.
Tensor
- The loss tensordict
- A dictionary. Can include any keys, but must include the key'loss'
None
- Training will skip to the next batch. This is only for automatic optimization.This is not supported for multi-GPU, TPU, IPU, or DeepSpeed.
In this step you’d normally do the forward pass and calculate the loss for a batch. You can also do fancier things like multiple forward passes or something model specific.
Example:
def training_step(self, batch, batch_idx): x, y, z = batch out = self.encoder(x) loss = self.loss(out, x) return loss
If you define multiple optimizers, this step will be called with an additional
optimizer_idx
parameter.# Multiple optimizers (e.g.: GANs) def training_step(self, batch, batch_idx, optimizer_idx): if optimizer_idx == 0: # do training_step with encoder ... if optimizer_idx == 1: # do training_step with decoder ...
If you add truncated back propagation through time you will also get an additional argument with the hidden states of the previous step.
# Truncated back-propagation through time def training_step(self, batch, batch_idx, hiddens): # hiddens are the hidden states from the previous truncated backprop step out, hiddens = self.lstm(data, hiddens) loss = ... return {"loss": loss, "hiddens": hiddens}
Note
The loss value shown in the progress bar is smoothed (averaged) over the last values, so it differs from the actual loss returned in train/validation step.
- validation_epoch_end(results) None [source]
Called at the end of the validation epoch with the outputs of all validation steps.
# the pseudocode for these calls val_outs = [] for val_batch in val_data: out = validation_step(val_batch) val_outs.append(out) validation_epoch_end(val_outs)
- Parameters:
outputs – List of outputs you defined in
validation_step()
, or if there are multiple dataloaders, a list containing a list of outputs for each dataloader.- Returns:
None
Note
If you didn’t define a
validation_step()
, this won’t be called.Examples
With a single dataloader:
def validation_epoch_end(self, val_step_outputs): for out in val_step_outputs: ...
With multiple dataloaders, outputs will be a list of lists. The outer list contains one entry per dataloader, while the inner list contains the individual outputs of each validation step for that dataloader.
def validation_epoch_end(self, outputs): for dataloader_output_result in outputs: dataloader_outs = dataloader_output_result.dataloader_i_outputs self.log("final_metric", final_value)
- validation_step(batch, batch_idx)[source]
Operates on a single batch of data from the validation set. In this step you’d might generate examples or calculate anything of interest like accuracy.
# the pseudocode for these calls val_outs = [] for val_batch in val_data: out = validation_step(val_batch) val_outs.append(out) validation_epoch_end(val_outs)
- Parameters:
- Returns:
Any object or value
None
- Validation will skip to the next batch
# pseudocode of order val_outs = [] for val_batch in val_data: out = validation_step(val_batch) if defined("validation_step_end"): out = validation_step_end(out) val_outs.append(out) val_outs = validation_epoch_end(val_outs)
# if you have one val dataloader: def validation_step(self, batch, batch_idx): ... # if you have multiple val dataloaders: def validation_step(self, batch, batch_idx, dataloader_idx): ...
Examples:
# CASE 1: A single validation dataset def validation_step(self, batch, batch_idx): x, y = batch # implement your own out = self(x) loss = self.loss(out, y) # log 6 example images # or generated text... or whatever sample_imgs = x[:6] grid = torchvision.utils.make_grid(sample_imgs) self.logger.experiment.add_image('example_images', grid, 0) # calculate acc labels_hat = torch.argmax(out, dim=1) val_acc = torch.sum(y == labels_hat).item() / (len(y) * 1.0) # log the outputs! self.log_dict({'val_loss': loss, 'val_acc': val_acc})
If you pass in multiple val dataloaders,
validation_step()
will have an additional argument.# CASE 2: multiple validation dataloaders def validation_step(self, batch, batch_idx, dataloader_idx): # dataloader_idx tells you which dataset this is. ...
Note
If you don’t need to validate you don’t need to implement this method.
Note
When the
validation_step()
is called, the model has been put in eval mode and PyTorch gradients have been disabled. At the end of validation, the model goes back to training mode and gradients are enabled.
GTransELitModel
- class unKR.lit_model.GTransELitModel.GTransELitModel(model, args)[source]
Bases:
BaseLitModel
Processing of training, evaluation and testing.
- configure_optimizers()[source]
Setting optimizer and lr_scheduler.
- Returns:
Record the optimizer and lr_scheduler, type: dict.
- Return type:
optim_dict
- forward(x)[source]
Same as
torch.nn.Module.forward()
.- Parameters:
*args – Whatever you decide to pass into the forward method.
**kwargs – Keyword arguments are also possible.
- Returns:
Your model’s output
- test_epoch_end(results) None [source]
Called at the end of a test epoch with the output of all test steps.
# the pseudocode for these calls test_outs = [] for test_batch in test_data: out = test_step(test_batch) test_outs.append(out) test_epoch_end(test_outs)
- Parameters:
outputs – List of outputs you defined in
test_step_end()
, or if there are multiple dataloaders, a list containing a list of outputs for each dataloader- Returns:
None
Note
If you didn’t define a
test_step()
, this won’t be called.Examples
With a single dataloader:
def test_epoch_end(self, outputs): # do something with the outputs of all test batches all_test_preds = test_step_outputs.predictions some_result = calc_all_results(all_test_preds) self.log(some_result)
With multiple dataloaders, outputs will be a list of lists. The outer list contains one entry per dataloader, while the inner list contains the individual outputs of each test step for that dataloader.
def test_epoch_end(self, outputs): final_value = 0 for dataloader_outputs in outputs: for test_step_out in dataloader_outputs: # do something final_value += test_step_out self.log("final_metric", final_value)
- test_step(batch, batch_idx)[source]
Operates on a single batch of data from the test set. In this step you’d normally generate examples or calculate anything of interest such as accuracy.
# the pseudocode for these calls test_outs = [] for test_batch in test_data: out = test_step(test_batch) test_outs.append(out) test_epoch_end(test_outs)
- Parameters:
- Returns:
Any of.
Any object or value
None
- Testing will skip to the next batch
# if you have one test dataloader: def test_step(self, batch, batch_idx): ... # if you have multiple test dataloaders: def test_step(self, batch, batch_idx, dataloader_idx): ...
Examples:
# CASE 1: A single test dataset def test_step(self, batch, batch_idx): x, y = batch # implement your own out = self(x) loss = self.loss(out, y) # log 6 example images # or generated text... or whatever sample_imgs = x[:6] grid = torchvision.utils.make_grid(sample_imgs) self.logger.experiment.add_image('example_images', grid, 0) # calculate acc labels_hat = torch.argmax(out, dim=1) test_acc = torch.sum(y == labels_hat).item() / (len(y) * 1.0) # log the outputs! self.log_dict({'test_loss': loss, 'test_acc': test_acc})
If you pass in multiple test dataloaders,
test_step()
will have an additional argument.# CASE 2: multiple test dataloaders def test_step(self, batch, batch_idx, dataloader_idx): # dataloader_idx tells you which dataset this is. ...
Note
If you don’t need to test you don’t need to implement this method.
Note
When the
test_step()
is called, the model has been put in eval mode and PyTorch gradients have been disabled. At the end of the test epoch, the model goes back to training mode and gradients are enabled.
- training_step(batch, batch_idx)[source]
Getting samples and training in KG model.
- Parameters:
batch – The training data.
batch_idx – The dict_key in batch, type: list.
- Returns:
The training loss for back propagation.
- Return type:
loss
- validation_epoch_end(results) None [source]
Called at the end of the validation epoch with the outputs of all validation steps.
# the pseudocode for these calls val_outs = [] for val_batch in val_data: out = validation_step(val_batch) val_outs.append(out) validation_epoch_end(val_outs)
- Parameters:
outputs – List of outputs you defined in
validation_step()
, or if there are multiple dataloaders, a list containing a list of outputs for each dataloader.- Returns:
None
Note
If you didn’t define a
validation_step()
, this won’t be called.Examples
With a single dataloader:
def validation_epoch_end(self, val_step_outputs): for out in val_step_outputs: ...
With multiple dataloaders, outputs will be a list of lists. The outer list contains one entry per dataloader, while the inner list contains the individual outputs of each validation step for that dataloader.
def validation_epoch_end(self, outputs): for dataloader_output_result in outputs: dataloader_outs = dataloader_output_result.dataloader_i_outputs self.log("final_metric", final_value)
PASSLEAFLitModel
- class unKR.lit_model.PASSLEAFLitModel.PASSLEAFLitModel(model, args)[source]
Bases:
BaseLitModel
Processing of training, evaluation and testing for PASSLEAF.
- configure_optimizers()[source]
Setting optimizer and lr_scheduler. :returns: Record the optimizer and lr_scheduler, type: dict. :rtype: optim_dict
- forward(x)[source]
Same as
torch.nn.Module.forward()
.- Parameters:
*args – Whatever you decide to pass into the forward method.
**kwargs – Keyword arguments are also possible.
- Returns:
Your model’s output
- test_epoch_end(results) None [source]
Called at the end of a test epoch with the output of all test steps.
# the pseudocode for these calls test_outs = [] for test_batch in test_data: out = test_step(test_batch) test_outs.append(out) test_epoch_end(test_outs)
- Parameters:
outputs – List of outputs you defined in
test_step_end()
, or if there are multiple dataloaders, a list containing a list of outputs for each dataloader- Returns:
None
Note
If you didn’t define a
test_step()
, this won’t be called.Examples
With a single dataloader:
def test_epoch_end(self, outputs): # do something with the outputs of all test batches all_test_preds = test_step_outputs.predictions some_result = calc_all_results(all_test_preds) self.log(some_result)
With multiple dataloaders, outputs will be a list of lists. The outer list contains one entry per dataloader, while the inner list contains the individual outputs of each test step for that dataloader.
def test_epoch_end(self, outputs): final_value = 0 for dataloader_outputs in outputs: for test_step_out in dataloader_outputs: # do something final_value += test_step_out self.log("final_metric", final_value)
- test_step(batch, batch_idx)[source]
Getting samples and validation in KG model.
- Parameters:
batch – The evalutaion data.
batch_idx – The dict_key in batch, type: list.
- Returns:
MAE, MSE, mrr, mr, wmrr, wmr, hits@1,3,5,10, raw_mrr, raw_wmr, raw_wmrr, raw_wmr, raw_hits@1,3,5,10
- Return type:
results
- training_epoch_end(loss) None [source]
Called at the end of the training epoch with the outputs of all training steps. Use this in case you need to do something with all the outputs returned by
training_step()
.# the pseudocode for these calls train_outs = [] for train_batch in train_data: out = training_step(train_batch) train_outs.append(out) training_epoch_end(train_outs)
- Parameters:
outputs – List of outputs you defined in
training_step()
. If there are multiple optimizers, it is a list containing a list of outputs for each optimizer. If usingtruncated_bptt_steps > 1
, each element is a list of outputs corresponding to the outputs of each processed split batch.- Returns:
None
Note
If this method is not overridden, this won’t be called.
def training_epoch_end(self, training_step_outputs): # do something with all training_step outputs for out in training_step_outputs: ...
- training_step(batch, batch_idx)[source]
Getting samples and training in KG model.
- Parameters:
batch – The training data.
batch_idx – The dict_key in batch, type: list.
- Returns:
The training loss for back propagation.
- Return type:
loss
- validation_epoch_end(results) None [source]
Called at the end of the validation epoch with the outputs of all validation steps.
# the pseudocode for these calls val_outs = [] for val_batch in val_data: out = validation_step(val_batch) val_outs.append(out) validation_epoch_end(val_outs)
- Parameters:
outputs – List of outputs you defined in
validation_step()
, or if there are multiple dataloaders, a list containing a list of outputs for each dataloader.- Returns:
None
Note
If you didn’t define a
validation_step()
, this won’t be called.Examples
With a single dataloader:
def validation_epoch_end(self, val_step_outputs): for out in val_step_outputs: ...
With multiple dataloaders, outputs will be a list of lists. The outer list contains one entry per dataloader, while the inner list contains the individual outputs of each validation step for that dataloader.
def validation_epoch_end(self, outputs): for dataloader_output_result in outputs: dataloader_outs = dataloader_output_result.dataloader_i_outputs self.log("final_metric", final_value)
- validation_step(batch, batch_idx)[source]
Getting samples and validation in KG model.
- Parameters:
batch – The evalutaion data.
batch_idx – The dict_key in batch, type: list.
- Returns:
MAE, MSE, mrr, mr, wmrr, wmr, hits@1,3,5,10, raw_mrr, raw_wmr, raw_wmrr, raw_wmr, raw_hits@1,3,5,10
- Return type:
results
UKGELitModel
- class unKR.lit_model.UKGELitModel.UKGELitModel(model, args)[source]
Bases:
BaseLitModel
Processing of training, evaluation and testing.
- configure_optimizers()[source]
Setting optimizer and lr_scheduler. :returns: Record the optimizer and lr_scheduler, type: dict. :rtype: optim_dict
- forward(x)[source]
Same as
torch.nn.Module.forward()
.- Parameters:
*args – Whatever you decide to pass into the forward method.
**kwargs – Keyword arguments are also possible.
- Returns:
Your model’s output
- test_epoch_end(results) None [source]
Called at the end of a test epoch with the output of all test steps.
# the pseudocode for these calls test_outs = [] for test_batch in test_data: out = test_step(test_batch) test_outs.append(out) test_epoch_end(test_outs)
- Parameters:
outputs – List of outputs you defined in
test_step_end()
, or if there are multiple dataloaders, a list containing a list of outputs for each dataloader- Returns:
None
Note
If you didn’t define a
test_step()
, this won’t be called.Examples
With a single dataloader:
def test_epoch_end(self, outputs): # do something with the outputs of all test batches all_test_preds = test_step_outputs.predictions some_result = calc_all_results(all_test_preds) self.log(some_result)
With multiple dataloaders, outputs will be a list of lists. The outer list contains one entry per dataloader, while the inner list contains the individual outputs of each test step for that dataloader.
def test_epoch_end(self, outputs): final_value = 0 for dataloader_outputs in outputs: for test_step_out in dataloader_outputs: # do something final_value += test_step_out self.log("final_metric", final_value)
- test_step(batch, batch_idx)[source]
Operates on a single batch of data from the test set. In this step you’d normally generate examples or calculate anything of interest such as accuracy.
# the pseudocode for these calls test_outs = [] for test_batch in test_data: out = test_step(test_batch) test_outs.append(out) test_epoch_end(test_outs)
- Parameters:
- Returns:
Any of.
Any object or value
None
- Testing will skip to the next batch
# if you have one test dataloader: def test_step(self, batch, batch_idx): ... # if you have multiple test dataloaders: def test_step(self, batch, batch_idx, dataloader_idx): ...
Examples:
# CASE 1: A single test dataset def test_step(self, batch, batch_idx): x, y = batch # implement your own out = self(x) loss = self.loss(out, y) # log 6 example images # or generated text... or whatever sample_imgs = x[:6] grid = torchvision.utils.make_grid(sample_imgs) self.logger.experiment.add_image('example_images', grid, 0) # calculate acc labels_hat = torch.argmax(out, dim=1) test_acc = torch.sum(y == labels_hat).item() / (len(y) * 1.0) # log the outputs! self.log_dict({'test_loss': loss, 'test_acc': test_acc})
If you pass in multiple test dataloaders,
test_step()
will have an additional argument.# CASE 2: multiple test dataloaders def test_step(self, batch, batch_idx, dataloader_idx): # dataloader_idx tells you which dataset this is. ...
Note
If you don’t need to test you don’t need to implement this method.
Note
When the
test_step()
is called, the model has been put in eval mode and PyTorch gradients have been disabled. At the end of the test epoch, the model goes back to training mode and gradients are enabled.
- training_step(batch, batch_idx)[source]
Getting samples and training in KG model.
- Parameters:
batch – The training data.
batch_idx – The dict_key in batch, type: list.
- Returns:
The training loss for back propagation.
- Return type:
loss
- validation_epoch_end(results) None [source]
Called at the end of the validation epoch with the outputs of all validation steps.
# the pseudocode for these calls val_outs = [] for val_batch in val_data: out = validation_step(val_batch) val_outs.append(out) validation_epoch_end(val_outs)
- Parameters:
outputs – List of outputs you defined in
validation_step()
, or if there are multiple dataloaders, a list containing a list of outputs for each dataloader.- Returns:
None
Note
If you didn’t define a
validation_step()
, this won’t be called.Examples
With a single dataloader:
def validation_epoch_end(self, val_step_outputs): for out in val_step_outputs: ...
With multiple dataloaders, outputs will be a list of lists. The outer list contains one entry per dataloader, while the inner list contains the individual outputs of each validation step for that dataloader.
def validation_epoch_end(self, outputs): for dataloader_output_result in outputs: dataloader_outs = dataloader_output_result.dataloader_i_outputs self.log("final_metric", final_value)
UKGEPSLLitModel
- class unKR.lit_model.UKGEPSLLitModel.UKGEPSLLitModel(model, args)[source]
Bases:
BaseLitModel
Processing of training, evaluation and testing for UKGEPSL.
- configure_optimizers()[source]
Setting optimizer and lr_scheduler. We use adam optimizer for UKGE, set β1 as 0.9, set β2 as 0.99. :returns: Record the optimizer and lr_scheduler, type: dict. :rtype: optim_dict
- forward(x)[source]
Same as
torch.nn.Module.forward()
.- Parameters:
*args – Whatever you decide to pass into the forward method.
**kwargs – Keyword arguments are also possible.
- Returns:
Your model’s output
- test_epoch_end(results) None [source]
Called at the end of a test epoch with the output of all test steps.
# the pseudocode for these calls test_outs = [] for test_batch in test_data: out = test_step(test_batch) test_outs.append(out) test_epoch_end(test_outs)
- Parameters:
outputs – List of outputs you defined in
test_step_end()
, or if there are multiple dataloaders, a list containing a list of outputs for each dataloader- Returns:
None
Note
If you didn’t define a
test_step()
, this won’t be called.Examples
With a single dataloader:
def test_epoch_end(self, outputs): # do something with the outputs of all test batches all_test_preds = test_step_outputs.predictions some_result = calc_all_results(all_test_preds) self.log(some_result)
With multiple dataloaders, outputs will be a list of lists. The outer list contains one entry per dataloader, while the inner list contains the individual outputs of each test step for that dataloader.
def test_epoch_end(self, outputs): final_value = 0 for dataloader_outputs in outputs: for test_step_out in dataloader_outputs: # do something final_value += test_step_out self.log("final_metric", final_value)
- test_step(batch, batch_idx)[source]
Getting samples and validation in KG model.
- Parameters:
batch – The evalutaion data.
batch_idx – The dict_key in batch, type: list.
- Returns:
MAE, MSE, mrr, mr, wmrr, wmr, hits@1,3,5,10, raw_mrr, raw_wmr, raw_wmrr, raw_wmr, raw_hits@1,3,5,10
- Return type:
results
- training_step(batch, batch_idx)[source]
Getting samples and training in KG model.
- Parameters:
batch – The training data.
batch_idx – The dict_key in batch, type: list.
- Returns:
The training loss for back propagation.
- Return type:
loss
- validation_epoch_end(results) None [source]
Called at the end of the validation epoch with the outputs of all validation steps.
# the pseudocode for these calls val_outs = [] for val_batch in val_data: out = validation_step(val_batch) val_outs.append(out) validation_epoch_end(val_outs)
- Parameters:
outputs – List of outputs you defined in
validation_step()
, or if there are multiple dataloaders, a list containing a list of outputs for each dataloader.- Returns:
None
Note
If you didn’t define a
validation_step()
, this won’t be called.Examples
With a single dataloader:
def validation_epoch_end(self, val_step_outputs): for out in val_step_outputs: ...
With multiple dataloaders, outputs will be a list of lists. The outer list contains one entry per dataloader, while the inner list contains the individual outputs of each validation step for that dataloader.
def validation_epoch_end(self, outputs): for dataloader_output_result in outputs: dataloader_outs = dataloader_output_result.dataloader_i_outputs self.log("final_metric", final_value)
- validation_step(batch, batch_idx)[source]
Getting samples and validation in KG model.
- Parameters:
batch – The evalutaion data.
batch_idx – The dict_key in batch, type: list.
- Returns:
MAE, MSE, mrr, mr, wmrr, wmr, hits@1,3,5,10, raw_mrr, raw_wmr, raw_wmrr, raw_wmr, raw_hits@1,3,5,10
- Return type:
results
UKGsELitModel
- class unKR.lit_model.UKGsELitModel.UKGsELitModel(model, args)[source]
Bases:
BaseLitModel
Processing of training, evaluation and testing.
- configure_optimizers()[source]
Setting optimizer and lr_scheduler.
- Returns:
Record the optimizer and lr_scheduler, type: dict.
- Return type:
optim_dict
- forward(x)[source]
Same as
torch.nn.Module.forward()
.- Parameters:
*args – Whatever you decide to pass into the forward method.
**kwargs – Keyword arguments are also possible.
- Returns:
Your model’s output
- test_epoch_end(results) None [source]
Called at the end of a test epoch with the output of all test steps.
# the pseudocode for these calls test_outs = [] for test_batch in test_data: out = test_step(test_batch) test_outs.append(out) test_epoch_end(test_outs)
- Parameters:
outputs – List of outputs you defined in
test_step_end()
, or if there are multiple dataloaders, a list containing a list of outputs for each dataloader- Returns:
None
Note
If you didn’t define a
test_step()
, this won’t be called.Examples
With a single dataloader:
def test_epoch_end(self, outputs): # do something with the outputs of all test batches all_test_preds = test_step_outputs.predictions some_result = calc_all_results(all_test_preds) self.log(some_result)
With multiple dataloaders, outputs will be a list of lists. The outer list contains one entry per dataloader, while the inner list contains the individual outputs of each test step for that dataloader.
def test_epoch_end(self, outputs): final_value = 0 for dataloader_outputs in outputs: for test_step_out in dataloader_outputs: # do something final_value += test_step_out self.log("final_metric", final_value)
- test_step(batch, batch_idx)[source]
Operates on a single batch of data from the test set. In this step you’d normally generate examples or calculate anything of interest such as accuracy.
# the pseudocode for these calls test_outs = [] for test_batch in test_data: out = test_step(test_batch) test_outs.append(out) test_epoch_end(test_outs)
- Parameters:
- Returns:
Any of.
Any object or value
None
- Testing will skip to the next batch
# if you have one test dataloader: def test_step(self, batch, batch_idx): ... # if you have multiple test dataloaders: def test_step(self, batch, batch_idx, dataloader_idx): ...
Examples:
# CASE 1: A single test dataset def test_step(self, batch, batch_idx): x, y = batch # implement your own out = self(x) loss = self.loss(out, y) # log 6 example images # or generated text... or whatever sample_imgs = x[:6] grid = torchvision.utils.make_grid(sample_imgs) self.logger.experiment.add_image('example_images', grid, 0) # calculate acc labels_hat = torch.argmax(out, dim=1) test_acc = torch.sum(y == labels_hat).item() / (len(y) * 1.0) # log the outputs! self.log_dict({'test_loss': loss, 'test_acc': test_acc})
If you pass in multiple test dataloaders,
test_step()
will have an additional argument.# CASE 2: multiple test dataloaders def test_step(self, batch, batch_idx, dataloader_idx): # dataloader_idx tells you which dataset this is. ...
Note
If you don’t need to test you don’t need to implement this method.
Note
When the
test_step()
is called, the model has been put in eval mode and PyTorch gradients have been disabled. At the end of the test epoch, the model goes back to training mode and gradients are enabled.
- training_step(batch, batch_idx)[source]
Getting samples and training in KG model.
- Parameters:
batch – The training data.
batch_idx – The dict_key in batch, type: list.
- Returns:
The training loss for back propagation.
- Return type:
loss
- validation_epoch_end(results) None [source]
Called at the end of the validation epoch with the outputs of all validation steps.
# the pseudocode for these calls val_outs = [] for val_batch in val_data: out = validation_step(val_batch) val_outs.append(out) validation_epoch_end(val_outs)
- Parameters:
outputs – List of outputs you defined in
validation_step()
, or if there are multiple dataloaders, a list containing a list of outputs for each dataloader.- Returns:
None
Note
If you didn’t define a
validation_step()
, this won’t be called.Examples
With a single dataloader:
def validation_epoch_end(self, val_step_outputs): for out in val_step_outputs: ...
With multiple dataloaders, outputs will be a list of lists. The outer list contains one entry per dataloader, while the inner list contains the individual outputs of each validation step for that dataloader.
def validation_epoch_end(self, outputs): for dataloader_output_result in outputs: dataloader_outs = dataloader_output_result.dataloader_i_outputs self.log("final_metric", final_value)
UPGATLitModel
- class unKR.lit_model.UPGATLitModel.UPGATLitModel(model, args)[source]
Bases:
BaseLitModel
Processing of training, evaluation and testing.
- configure_optimizers()[source]
Setting optimizer and lr_scheduler.
- Returns:
Record the optimizer and lr_scheduler, type: dict.
- Return type:
optim_dict
- forward(x)[source]
Same as
torch.nn.Module.forward()
.- Parameters:
*args – Whatever you decide to pass into the forward method.
**kwargs – Keyword arguments are also possible.
- Returns:
Your model’s output
- test_epoch_end(results) None [source]
Called at the end of a test epoch with the output of all test steps.
# the pseudocode for these calls test_outs = [] for test_batch in test_data: out = test_step(test_batch) test_outs.append(out) test_epoch_end(test_outs)
- Parameters:
outputs – List of outputs you defined in
test_step_end()
, or if there are multiple dataloaders, a list containing a list of outputs for each dataloader- Returns:
None
Note
If you didn’t define a
test_step()
, this won’t be called.Examples
With a single dataloader:
def test_epoch_end(self, outputs): # do something with the outputs of all test batches all_test_preds = test_step_outputs.predictions some_result = calc_all_results(all_test_preds) self.log(some_result)
With multiple dataloaders, outputs will be a list of lists. The outer list contains one entry per dataloader, while the inner list contains the individual outputs of each test step for that dataloader.
def test_epoch_end(self, outputs): final_value = 0 for dataloader_outputs in outputs: for test_step_out in dataloader_outputs: # do something final_value += test_step_out self.log("final_metric", final_value)
- test_step(batch, batch_idx)[source]
Getting samples and test in KG model.
- Parameters:
batch – The test data.
batch_idx – The dict_key in batch, type: list.
- Returns:
MAE, MSE, mrr, mr, wmrr, wmr and hits@1,3,5,10.
- Return type:
results
- training_step(batch, batch_idx)[source]
Getting samples and training in KG model.
- Parameters:
batch – The training data.
batch_idx – The dict_key in batch, type: list.
- Returns:
The training loss for back propagation.
- Return type:
loss
- validation_epoch_end(results) None [source]
Called at the end of the validation epoch with the outputs of all validation steps.
# the pseudocode for these calls val_outs = [] for val_batch in val_data: out = validation_step(val_batch) val_outs.append(out) validation_epoch_end(val_outs)
- Parameters:
outputs – List of outputs you defined in
validation_step()
, or if there are multiple dataloaders, a list containing a list of outputs for each dataloader.- Returns:
None
Note
If you didn’t define a
validation_step()
, this won’t be called.Examples
With a single dataloader:
def validation_epoch_end(self, val_step_outputs): for out in val_step_outputs: ...
With multiple dataloaders, outputs will be a list of lists. The outer list contains one entry per dataloader, while the inner list contains the individual outputs of each validation step for that dataloader.
def validation_epoch_end(self, outputs): for dataloader_output_result in outputs: dataloader_outs = dataloader_output_result.dataloader_i_outputs self.log("final_metric", final_value)